Project details for Differential Dependency Network cabig cytoscape plugin

Screenshot Differential Dependency Network cabig cytoscape plugin 1.0

by cbil - October 27, 2013, 17:31:58 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ]

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Description:

Differential dependency network (DDN) is a caBIGĀ® (cancer Biomedical Informatics Grid) analytical tool for detecting and visualizing statistically significant topological changes in transcriptional networks representing two biological conditions. Developed under caBIGĀ®'s In Silico Research Centers of Excellence (ISRCE) Program, DDN enables differential network analysis and provides an alternative way for defining network biomarkers predictive of phenotypes. DDN also serves as a useful systems biology tool for users across biomedical research communities to infer how genetic, epigenetic or environment variables may affect biological networks and clinical phenotypes. Besides the standalone Java application, we have also developed a Cytoscape plug-in, CytoDDN, to integrate network analysis and visualization seamlessly.

Changes to previous version:

Initial Announcement on mloss.org.

BibTeX Entry: Download
Corresponding Paper BibTeX Entry: Download
URL: Project Homepage
Supported Operating Systems: Linux, Windows, Mac Os X
Data Formats: Csv
Tags: Visualization, Lasso, Cytoscape, Differential Network, Graphical Model, Ddn
Archive: download here

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