Projects that are tagged with fmri.


Logo PyMVPA Multivariate Pattern Analysis in Python 0.4.4

by yarikoptic - February 7, 2010, 16:48:00 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 10043 views, 1931 downloads, 1 subscription

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About: Python module to ease pattern classification analyses of large datasets. It provides high-level abstraction of typical processing steps (e.g. data preparation, classification, feature selection, [...]

Changes:

0.4.4 (Mon, Feb 2 2010) (Total: 144 commits)

Primarily a bugfix release, probably the last in 0.4 series since development for 0.5 release is leaping forward.

  • New functionality (19 NF commits):

o GNB implements Gaussian Naïve Bayes Classifier.

o read_fsl_design() to read FSL FEAT design.fsf files (Contributed by Russell A. Poldrack).

o SequenceStats to provide basic statistics on labels sequence (counter-balancing, autocorrelation).

o New exceptions DegenerateInputError and FailedToTrainError to be thrown by classifiers primarily during training/testing.

o Debug target STATMC to report on progress of Monte-Carlo sampling (during permutation testing).

  • Refactored (15 RF commits):

o To get users prepared to 0.5 release, internally and in some examples/documentation, access to states and parameters is done via corresponding collections, not from the top level object (e.g. clf.states.predictions instead of soon-to-be-deprecated clf.predictions). That should lead also to improved performance.

o Adopted copy.py from python2.6 (support Ellipsis as well). ed (38 BF commits):

o GLM output does not depend on the enabled states any more.

o Variety of docstrings fixed and/or improved.

o Do not derive NaN scaling for SVM’s C whenever data is degenerate (lead to never finishing SVM training).

o sg : + KRR is optional now – avoids crashing if KRR is not available.

  • tolerance to absent set_precompute_matrix in svmlight in recent shogun versions.

  • support for recent (present in 0.9.1) API change in exposing debug levels.

o Python 2.4 compatibility issues: kNN and IFS


Logo Finding nonlinear and stochastic structures in time series 1

by Dante - October 29, 2008, 11:14:44 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 2228 views, 430 downloads, 2 subscriptions

About: The Delay vector variance (DVV) method uses predictability of the signal in phase space to characterize the time series. Using the surrogate data methodology, so called DVV plots and DVV scatter [...]

Changes:

Initial Announcement on mloss.org.