Projects running under linux.
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Logo hca 0.63

by wbuntine - April 26, 2016, 15:35:03 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 15793 views, 2540 downloads, 4 subscriptions

About: Multi-core non-parametric and bursty topic models (HDP-LDA, DCMLDA, and other variants of LDA) implemented in C using efficient Gibbs sampling, with hyperparameter sampling and other flexible controls.

Changes:

Corrected the new normalised Gamma model for topics so it works with multicore. Improvements to documentation. Added an asymptotic version of the generalised Stirling numbers so it longer fails when they run out of bounds on bigger data.


Logo Armadillo library 6.700

by cu24gjf - April 24, 2016, 05:08:11 CET [ Project Homepage BibTeX Download ] 82165 views, 16735 downloads, 5 subscriptions

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About: Armadillo is a high quality C++ linear algebra library, aiming towards a good balance between speed and ease of use. The function syntax is deliberately similar to MATLAB. Useful for algorithm development directly in C++, or quick conversion of research code into production environments (eg. software & hardware products).

Changes:
  • added trapz() for numerical integration
  • added logmat() for calcuating the matrix logarithm
  • added approx_equal() for determining approximate equality
  • added regspace() for generating vectors with regularly spaced elements
  • added logspace() for generating vectors with logarithmically spaced elements
  • expanded .save() and .load() with hdf5_binary_trans file type, to save/load data with columns transposed to rows
  • fixes for trunc_log() and trunc_exp()

Logo JMLR Information Theoretical Estimators 0.62

by szzoli - April 17, 2016, 17:19:00 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 98823 views, 19157 downloads, 3 subscriptions

About: ITE (Information Theoretical Estimators) is capable of estimating many different variants of entropy, mutual information, divergence, association measures, cross quantities and kernels on distributions. Thanks to its highly modular design, ITE supports additionally (i) the combinations of the estimation techniques, (ii) the easy construction and embedding of novel information theoretical estimators, and (iii) their immediate application in information theoretical optimization problems.

Changes:
  • Von Mises expansion based estimators: included for 7 unconditional quantities (Shannon entropy, Shannon mutual information, Kullback-Leibler divergence, Rényi divergence, Tsallis divergence, Pearson Chi^2 divergence, Hellinger distance.

  • Analytical value (for Gaussian random variables) and quick test: added for the Hellinger distance.


Logo Harry 0.4.2

by konrad - April 16, 2016, 10:50:38 CET [ Project Homepage BibTeX Download ] 8377 views, 1853 downloads, 3 subscriptions

About: A Tool for Measuring String Similarity

Changes:

This release fixes the incorrect implementation of the bag distance.


About: TBEEF, a doubly ensemble framework for recommendation and prediction problems.

Changes:

Included the final technical report.


Logo WEKA 3.9.0

by mhall - April 15, 2016, 06:35:30 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 57580 views, 8599 downloads, 5 subscriptions

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About: The Weka workbench contains a collection of visualization tools and algorithms for data analysis and predictive modelling, together with graphical user interfaces for easy access to this [...]

Changes:

In core weka:

  • JAMA-based linear algebra routines replaced with MTJ. Faster operation with the option to use native libraries for even more speed
  • General efficiency improvements in core, filters and some classifiers
  • GaussianProcesses now handles instance weights
  • New Knowledge Flow implementation. Engine completely rewritten from scratch with a simplified API
  • New Workbench GUI
  • GUI package manager now has a search facility
  • FixedDictionaryStringToWordVector filter allows the use of an external dictionary for vectorization. DictionarySaver converter can be used to create a dictionary file

In packages:

  • Packages that were using JAMA are now using MTJ
  • New netlibNativeOSX, netlibNativeWindows and netlibNativeLinux packages providing native reference implementations (and system-optimized implementation in the case of OSX) of BLAS, LAPACK and ARPACK linear algebra
  • New elasticNet package, courtesy of Nikhil Kinshore
  • New niftiLoader package for loading a directory with MIR data in NIfTI format into Weka
  • New percentageErrorMetrics package - provides plugin evaluation metrics for root mean square percentage error and mean absolute percentage error
  • New iterativeAbsoluteErrorRegression package - provides a meta learner that fits a regression model to minimize absolute error
  • New largeScaleKernelLearning package - contains filters for large-scale kernel-based learning
  • discriminantAnalysis package now contains an implementation for LDA and QDA
  • New Knowledge Flow component implementations in various packages
  • newKnowledgeFlowStepExamples package - contains code examples for new Knowledge Flow API discussion in the Weka Manual
  • RPlugin updated to latest version of MLR
  • scatterPlot3D and associationRulesVisualizer packages updated with latest Java 3D libraries
  • Support for pluggable activation functions in the multiLayerPerceptrons package

Logo QMiner 5.0.0

by blazfortuna - April 8, 2016, 14:17:58 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 1311 views, 226 downloads, 2 subscriptions

About: Analytic engine for real-time large-scale streams containing structured and unstructured data.

Changes:

Initial Announcement on mloss.org.


Logo Theano 0.8.1

by jaberg - April 1, 2016, 19:22:01 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 24141 views, 4206 downloads, 3 subscriptions

About: A Python library that allows you to define, optimize, and evaluate mathematical expressions involving multi-dimensional arrays efficiently. Dynamically generates CPU and GPU modules for good performance. Deep Learning Tutorials illustrate deep learning with Theano.

Changes:

Theano 0.8.1 (29th of March, 2016)

* Fix compilation on Mac with CLT 7.3

Theano 0.8 (21th of March, 2016)

We recommend to everyone to upgrade to this version.

Highlights:

* Python 2 and 3 support with the same code base
* Faster optimization
* Integration of CuDNN for better GPU performance
* Many Scan improvements (execution speed up, ...)
* optimizer=fast_compile moves computation to the GPU.
* Better convolution on CPU and GPU. (CorrMM, cudnn, 3d conv, more parameter)
* Interactive visualization of graphs with d3viz
* cnmem (better memory management on GPU)
* BreakpointOp
* Multi-GPU for data parallism via Platoon (https://github.com/mila-udem/platoon/)
* More pooling parameter supported
* Bilinear interpolation of images
* New GPU back-end:

    * Float16 new back-end (need cuda 7.5)
    * Multi dtypes
    * Multi-GPU support in the same process

Logo FEAST 1.1.4

by apocock - March 12, 2016, 18:35:08 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 32963 views, 6383 downloads, 3 subscriptions

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About: FEAST provides implementations of common mutual information based filter feature selection algorithms (mim, mifs, mrmr, cmim, icap, jmi, disr, fcbf, etc), and an implementation of RELIEF. Written for C/C++ & Matlab.

Changes:
  • Fixed an issue where zero MI values would cause it to segfault.
  • Fixes to documentation and comments.
  • Updated internal version of MIToolbox.

Logo Toupee 0.1

by nitbix - March 7, 2016, 20:29:59 CET [ Project Homepage BibTeX Download ] 559 views, 131 downloads, 3 subscriptions

About: A Python based library for running experiments with Deep Learning and Ensembles on GPUs.

Changes:

Initial Announcement on mloss.org.


Logo Java Statistical Analysis Tool 0.0.4

by EdwardRaff - March 5, 2016, 06:28:14 CET [ Project Homepage BibTeX Download ] 688 views, 178 downloads, 2 subscriptions

About: General purpose Java Machine Learning library for classification, regression, and clustering.

Changes:

Initial Announcement on mloss.org.


Logo libcluster 2.3

by dsteinberg - February 27, 2016, 00:36:01 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 3694 views, 781 downloads, 3 subscriptions

About: An extensible C++ library of Hierarchical Bayesian clustering algorithms, such as Bayesian Gaussian mixture models, variational Dirichlet processes, Gaussian latent Dirichlet allocation and more.

Changes:

New maximum cluster argument for all algorithms. Also no more matlab interface since it seemed no one was using it, and I cannot support it any longer.


Logo Somoclu 1.6.1

by peterwittek - February 22, 2016, 10:42:47 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 14909 views, 2934 downloads, 3 subscriptions

About: Somoclu is a massively parallel implementation of self-organizing maps. It relies on OpenMP for multicore execution, MPI for distributing the workload, and it can be accelerated by CUDA on a GPU cluster. A sparse kernel is also included, which is useful for training maps on vector spaces generated in text mining processes. Apart from a command line interface, Python, R, and MATLAB are supported.

Changes:
  • New: Option for PCA initialization is added to the Python interface.
  • New: Clustering of the codebook with arbitrary clustering algorithm in scikit-learn is now possible in the Python interface.

Logo JMLR Jstacs 2.2

by keili - February 17, 2016, 11:57:56 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 21791 views, 5101 downloads, 3 subscriptions

About: A Java framework for statistical analysis and classification of biological sequences

Changes:

New classes and packages:

  • CorreationCoefficient: PerformanceMeasure
  • de.jstacs.clustering: package with classes for hierarchical clustering
  • DeBruijnGraphSequenceGenerator and DeBruijnSequenceGenerator for generating De Buijn sequences
  • CyclicSequenceAdaptor for representing cyclic sequences
  • PlotGeneratorResult for representing results that plot images to a Graphics2D object
  • TextResult for results that may be stored as text files
  • package de.jstacs.results.savers for generic classes that store results to disk
  • LimitedSparseLocalInhomogeneousMixtureDiffSM_higherOrder for sparse local inhomogeneous mixture (Slim) models
  • PFMWrapperTrainSM for representing position frequency matrices and position weight matrices from databases
  • package de.jstacs.tools with classes for generic Jstacs tools that may be used in different user interfaces (command line, Galaxy, JavaFX)
  • Compression for ZIP compression of Strings
  • package de.jstacs.utils.graphics with generic GraphicsAdaptor using Apache XML commons
  • projects: Dimont, GeMoMa, Slim, TALEN, motif comparison

New features and improvements:

  • Major restructuring of Alignment for better efficiency
  • Alignment Costs and StringAlignment now Storable
  • New constructor of DataSet allowing a specified percentage of sequences to mismatch the given alphabet
  • BioJavaAdapter ported to BioJava 1.9
  • XMLParser now also allows for storing Sequences
  • New method for parsing HMMer profile HMMs in HMMFactory
  • Several minor improvements and bugfixes in many classes
  • Improvements of documentation of several classes

Logo OpenNN 3.0

by Sergiointelnics - February 11, 2016, 16:55:37 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 5943 views, 1085 downloads, 4 subscriptions

About: OpenNN is an open source class library written in C++ programming language which implements neural networks, a main area of deep learning research. The library has been designed to learn from both data sets and mathematical models.

Changes:

New algorithms, correction of bugs, model selection algorithms.


Logo Libra 1.1.2d

by lowd - February 4, 2016, 08:51:50 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 20019 views, 4290 downloads, 3 subscriptions

About: The Libra Toolkit is a collection of algorithms for learning and inference with discrete probabilistic models, including Bayesian networks, Markov networks, dependency networks, sum-product networks, arithmetic circuits, and mixtures of trees.

Changes:

Version 1.1.2d (12/29/2015):

  • Minor fixes to scripts
  • Published in JMLR ML-OSS!

Logo MIToolbox 2.1.2

by apocock - January 10, 2016, 22:19:30 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 24987 views, 4401 downloads, 2 subscriptions

About: A mutual information library for C and Mex bindings for MATLAB. Aimed at feature selection, and provides simple methods to calculate mutual information, conditional mutual information, entropy, conditional entropy, Renyi entropy/mutual information, and weighted variants of Shannon entropies/mutual informations. Works with discrete distributions, and expects column vectors of features.

Changes:

Relicensed as BSD. Added checks to catch MATLAB inputs that aren't doubles.


Logo DiffSharp 0.7.7

by gbaydin - January 4, 2016, 00:57:35 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 8295 views, 1716 downloads, 3 subscriptions

About: DiffSharp is a functional automatic differentiation (AD) library providing gradients, Hessians, Jacobians, directional derivatives, and matrix-free Hessian- and Jacobian-vector products as higher-order functions. It allows exact and efficient calculation of derivatives, with support for nesting.

Changes:

Fixed: Bug fix in forward AD implementation of Sigmoid and ReLU for D, DV, and DM (fixes #16, thank you @mrakgr)

Improvement: Performance improvement by removing several more Parallel.For and Array.Parallel.map operations, working better with OpenBLAS multithreading

Added: Operations involving incompatible dimensions of DV and DM will now throw exceptions for warning the user


Logo Lua MapReduce v0.4.0

by pakozm - December 23, 2015, 09:32:11 CET [ Project Homepage BibTeX Download ] 6348 views, 1448 downloads, 3 subscriptions

About: Lua-MapReduce framework implemented in Lua using luamongo driver and MongoDB as storage. It follows Iterative MapReduce for training of Machine Learning statistical models.

Changes:
  • Updated to work with luamongo v0.5.0, which uses C++ driver legacy-1.1.0

Logo MLweb 0.1.3

by lauerfab - December 17, 2015, 10:29:35 CET [ Project Homepage BibTeX Download ] 3528 views, 881 downloads, 3 subscriptions

About: MLweb is an open source project that aims at bringing machine learning capabilities into web pages and web applications, while maintaining all computations on the client side. It includes (i) a javascript library to enable scientific computing within web pages, (ii) a javascript library implementing machine learning algorithms for classification, regression, clustering and dimensionality reduction, (iii) a web application providing a matlab-like development environment.

Changes:
  • Improve NaiveBayes classifier
  • Add online training functions for KNN and NaiveBayes
  • Fix save/load workspace in LALOLab
  • Fix nullspace()
  • Small bug fixes

Showing Items 1-20 of 263 on page 1 of 14: 1 2 3 4 5 6 Next Last