Projects running under cygwin.
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Logo jblas 1.1.1

by mikio - September 1, 2010, 13:53:51 CET [ Project Homepage BibTeX Download ] 3435 views, 781 downloads, 1 subscription

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About: jblas is a fast linear algebra library for Java. jblas is based on BLAS and LAPACK, the de-facto industry standard for matrix computations, and uses state-of-the-art implementations like ATLAS for all its computational routines, making jBLAS very fast.

Changes:

Changes from 1.0:

  • Added singular value decomposition
  • Fixed bug with returning complex values
  • Many other minor improvements

Logo CARP 2.0

by volmeln - August 27, 2010, 06:16:07 CET [ Project Homepage BibTeX Download ] 795 views, 267 downloads, 1 subscription

About: CARP: The Clustering Algorithms’ Referee Package

Changes:

Options to add noise, outliers, inverse Box-Cox transformation.


Logo libDAI 0.2.7

by jorism - August 19, 2010, 17:18:00 CET [ Project Homepage BibTeX Download ] 7867 views, 1229 downloads, 2 subscriptions

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About: libDAI provides free & open source implementations of various (approximate) inference methods for graphical models with discrete variables, including Bayesian networks and Markov Random Fields.

Changes:

libDAI release 0.2.7 is a bug-fix release which fixes a bug in the junction-tree MAP inference which could yield incorrect results in some cases. This release will accompany a forthcoming JMLR publication about libDAI.


Logo WEKA 3.7.2

by mhall - August 2, 2010, 11:17:22 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 9591 views, 1829 downloads, 2 subscriptions

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About: The Weka workbench contains a collection of visualization tools and algorithms for data analysis and predictive modelling, together with graphical user interfaces for easy access to this [...]

Changes:

Initial Announcement on mloss.org.


Logo Libra 0.3.0

by lowd - August 2, 2010, 07:21:28 CET [ Project Homepage BibTeX Download ] 1258 views, 222 downloads, 1 subscription

About: The Libra machine learning toolkit includes implementations of a variety of algorithms for learning and inference with Bayesian networks, Markov networks, and arithmetic circuits. Libra's strength is exploiting context-specific independence to allow exact inference in models with high treewidth.

Changes:

Version 0.3.0 (8/01/2010):

  • New data structure and functions for Markov networks with factors that are trees, tables, conjunctive features, or sets of conjunctive features.
  • Added MN support to ACVE, BP, MF, Gibbs, and more.
  • AC, BN, and MN scoring is now handled by a single program, mscore.
  • Added mscore utility to convert between .xmod and .bif formats, or to go from .xmod/.bif to .mn (Markov network format).
  • Added -noac option to aclearnstruct, so that it can be used to learn a Bayesian network that isn't represented as a circuit.
  • Added dependency network learner (dnlearn)
  • Extended tutorial, revised manual, and added more tests.

Logo JMLR SHOGUN 0.9.3

by sonne - July 2, 2010, 23:33:12 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 14905 views, 2861 downloads, 4 subscriptions

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About: The SHOGUN machine learning toolbox's focus is on large scale learning methods with focus on Support Vector Machines (SVM), providing interfaces to python, octave, matlab, r and the command line.

Changes:

This release contains several enhancements, cleanups and bugfixes:

Features

  • Experimental lp-norm MCMKL
  • New Kernels: SpectrumRBFKernelRBF, SpectrumMismatchRBFKernel, WeightedDegreeRBFKernel
  • WDK kernel supports amino acids
  • String Features now support append operations
  • python-dbg support
  • Allow floats as input for custom kernel (and matrices > 4GB in size)

Bugfixes

  • Static linking fix.
  • Fix sparse linear kernel's add_to_normal

Cleanup and API Changes

  • Remove init() function in Performance Measures
  • Adjust .so suffix for python and use python distutils to figure out install paths

Logo JMLR MOA Massive Online Analysis June-09

by abifet - June 4, 2010, 14:05:31 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 1227 views, 379 downloads, 1 subscription

About: Massive Online Analysis (MOA) is a real time analytic tool for data streams. It is a software environment for implementing algorithms and running experiments for online learning from evolving data streams. MOA includes a collection of offline and online methods as well as tools for evaluation. In particular, it implements boosting, bagging, and Hoeffding Trees, all with and without Naive Bayes classifiers at the leaves. MOA supports bi-directional interaction with WEKA, the Waikato Environment for Knowledge Analysis, and it is released under the GNU GPL license.

Changes:

Initial Announcement on mloss.org.


Logo asp 0.3

by sonne - May 7, 2010, 10:25:39 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 2230 views, 503 downloads, 1 subscription

About: Accurate splice site predictor for a variety of genomes.

Changes:

Asp now supports three formats:

-g fname for gff format

-s fname for spf format

-b dir for a binary format compatible with mGene.

And a new switch

-t which switches on a sigmoid-based transformation of the svm scores to get scores between 0 and 1.


Logo Jstacs 1.3.1

by keili - March 2, 2010, 14:15:46 CET [ Project Homepage BibTeX Download ] 1910 views, 372 downloads, 1 subscription

About: A Java framework for statistical analysis and classification of biological sequences

Changes:

March 2, 2010: Jstacs 1.3.1 released

  • Partitioning of Samples including weights

  • Release of Dispom (de-novo discovery of differentially abundant transcription factor binding sites including their positional preference)

  • Several bugfixes


Logo LIBSVM 2.9

by cjlin - February 27, 2010, 01:09:23 CET [ Project Homepage BibTeX Download ] 5113 views, 1112 downloads, 1 subscription

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About: LIBSVM is an integrated software for support vector classification, (C-SVC, nu-SVC ), regression (epsilon-SVR, nu-SVR) and distribution estimation (one-class SVM). It supports multi-class [...]

Changes:

Initial Announcement on mloss.org.


About: A Java library to create, process and manage mixtures of exponential families.

Changes:

Initial Announcement on mloss.org.


Logo MLPACK 0.2

by fastlab - November 20, 2009, 04:01:36 CET [ BibTeX BibTeX for corresponding Paper Download ] 7652 views, 1682 downloads, 3 subscriptions

About: MLPACK is the first comprehensive scalable machine learning library.

Changes:

Initial Announcement on mloss.org.


Logo JMLR RL Glue and Codecs -- Glue 3.x and Codecs

by btanner - October 12, 2009, 07:50:03 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 6654 views, 859 downloads, 1 subscription

About: RL-Glue allows agents, environments, and experiments written in Java, C/C++, Matlab, Python, and Lisp to inter operate, accelerating research by promoting software re-use in the community.

Changes:

RL-Glue paper has been published in JMLR.


Logo LibSGDQN 1.1

by antojne - July 2, 2009, 15:02:44 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 1860 views, 398 downloads, 1 subscription

About: LibSGDQN proposes an implementation of SGD-QN, a carefully designed quasi-Newton stochastic gradient descent solver for linear SVMs.

Changes:

small bug fix (thx nicolas ;)


Logo OLaRankGreedy 1.0

by antojne - June 24, 2009, 17:07:57 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 1310 views, 269 downloads, 1 subscription

About: OLaRankGreedy is an online solver of the dual formulation of support vector machines for sequence labeling using greedy inference.

Changes:

Initial Announcement on mloss.org.


Logo OLaRankExact 1.0

by antojne - June 24, 2009, 17:03:48 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 1277 views, 265 downloads, 1 subscription

About: OLaRank is an online solver of the dual formulation of support vector machines for sequence labeling using viterbi decoding.

Changes:

Initial Announcement on mloss.org.


Logo C MixSim 0.5

by volmeln - June 10, 2009, 19:37:42 CET [ Project Homepage BibTeX Download ] 1616 views, 381 downloads, 1 subscription

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About: C-MixSim is an open source package written in C for simulating finite mixture models with Gaussian components. With a vast number of clustering algorithms, evaluating performance is important. C-MixSim provides an easy and convenient way of generating datasets from Gaussian mixture models with different levels of clustering complexity. C-MixSim is released under the GNU GPL license.

Changes:

Initial Announcement on mloss.org.


Logo arts 0.2

by sonne - May 25, 2009, 09:56:31 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 1627 views, 350 downloads, 1 subscription

About: ARTS is an accurate predictor for Transcription Start Sites (TSS).

Changes:

Initial Announcement on mloss.org.


Logo JMLR pebl Python Environment for Bayesian Learning 1.0.1

by abhik - March 5, 2009, 00:05:28 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 11130 views, 1059 downloads, 1 subscription

About: Pebl is a python library and command line application for learning the structure of a Bayesian network given prior knowledge and observations.

Changes:

Updated version to 1.0.1


Logo SVQP 2

by leonbottou - January 31, 2009, 14:22:04 CET [ Project Homepage BibTeX Download ] 2374 views, 932 downloads, 0 subscriptions

About: SVQP1 and SVQP2 are QP solvers for training SVM.

Changes:

Initial Announcement on mloss.org.


Showing Items 1-20 of 31 on page 1 of 2: 1 2 Next