Projects running under cygwin.
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Logo Jstacs 1.3.1

by keili - March 2, 2010, 14:15:46 CET [ Project Homepage BibTeX Download ] 835 views, 169 downloads, 1 subscription

About: A Java framework for statistical analysis and classification of biological sequences

Changes:

March 2, 2010: Jstacs 1.3.1 released

  • Partitioning of Samples including weights

  • Release of Dispom (de-novo discovery of differentially abundant transcription factor binding sites including their positional preference)

  • Several bugfixes


Logo LIBSVM 2.9

by cjlin - February 27, 2010, 01:09:23 CET [ Project Homepage BibTeX Download ] 3996 views, 875 downloads, 1 subscription

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About: LIBSVM is an integrated software for support vector classification, (C-SVC, nu-SVC ), regression (epsilon-SVR, nu-SVR) and distribution estimation (one-class SVM). It supports multi-class [...]

Changes:

Initial Announcement on mloss.org.


Logo libDAI 0.2.4

by jorism - February 11, 2010, 13:08:01 CET [ Project Homepage BibTeX Download ] 5365 views, 859 downloads, 2 subscriptions

About: libDAI provides FOSS implementations of various (approximate) inference methods for graphical models with discrete variables, including Bayesian networks and Markov Random Fields.

Changes:

New features include:

* approximate inference method "Fractional Belief Propagation" (contributed by Frederik Eaton)
* approximate inference method "Tree-Reweighted Belief Propagation"

Apart from that, this release various code cleanups, bug fixes, added examples, and documentation improvements.


Logo WEKA 3.7.1

by mhall - January 12, 2010, 21:50:10 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 7089 views, 1471 downloads, 2 subscriptions

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About: The Weka workbench contains a collection of visualization tools and algorithms for data analysis and predictive modelling, together with graphical user interfaces for easy access to this [...]

Changes:

Initial Announcement on mloss.org.


Logo jblas 1.0

by mikio - December 22, 2009, 10:47:12 CET [ Project Homepage BibTeX Download ] 2223 views, 544 downloads, 1 subscription

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About: jblas is a fast linear algebra library for Java. jblas is based on BLAS and LAPACK, the de-facto industry standard for matrix computations, and uses state-of-the-art implementations like ATLAS for all its computational routines, making jBLAS very fast.

Changes:

Release 1.0 - December 22, 2009

Changes from 0.2:

  • Default jar now contains JNI libraries including ATLAS for Windows, Linux, and Mac OS X, 32bit and 64bit (64bit version for Windows missing right now)

  • Build for Mac OS X

  • configure script has been overhauled.

  • Matrix classes are now serializable.

  • added LAPACK functions [sdcz]geev, [sd]getrf, [sd]potrf

  • Added interfaces ConvertsToDoubleMatrix and ConverstToFloatMatrix

  • Added class Decompose which provides LUDecomposition (based on getrf), and Cholesky decomposition (based on potrf)

  • Matrix classes:

  • Added read-only AbstractList views for elements, rows, and columns for better interfacing with Java's collection API.

  • Added matrix exponentials (MatrixFunctions.expm) based on Pade approximation provided by Jan Saptra Müller. These should be pretty fast!

  • Added prod() which returns the product of all elements.

  • Added project() which projects one vector on another.

  • Added diviRowVector().

  • Added loadCSVFile().

  • Added MatrixFunctions.min() and .max() for integers.

  • Added Permutations class for generating random permutations and subsets based on the algorithms from Knuth's "The Art of Computer Programming", Vol. 2.


About: A Java library to create, process and manage mixtures of exponential families.

Changes:

Initial Announcement on mloss.org.


Logo MLPACK 0.2

by fastlab - November 20, 2009, 04:01:36 CET [ BibTeX BibTeX for corresponding Paper Download ] 5779 views, 1406 downloads, 3 subscriptions

About: MLPACK is the first comprehensive scalable machine learning library.

Changes:

Initial Announcement on mloss.org.


Logo SHOGUN 0.9.1

by sonne - November 16, 2009, 11:02:41 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 10924 views, 2076 downloads, 5 subscriptions

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About: The SHOGUN machine learning toolbox's focus is on large scale learning methods with focus on Support Vector Machines (SVM), providing interfaces to python, octave, matlab, r and the command line.

Changes:

This release contains several enhancements, cleanups and bugfixes:

Features

  • Integrate LaRank.
  • Memory Mapped Features (for data sets that don't fit into memory).
  • Compressor module with compression and decompression support for lzo, gzip, bzip2 and lzma.
  • Compressed String Features with on-the-fly decompression (CDecompressString preproc).
  • Parallel computation of get_kernel_matrix().
  • One may now prefix all shogun print/outputs with file name and line number (obj.io.enable_file_and_line())
  • Chinese Documentation thanks Elpmis Lee.

Bugfixes

  • Fix One class MKL testing in static interfaces.
  • Configure fixes: Let octave not write history on configure; fail when cplex is forcefully enabled but not found; add cplex 12 support.
  • Fix a problem with regression and CombinedKernels employing only Custom kernels.

Cleanup and API Changes

  • String Features now (like SimpleFeatures) upon get_feature_vector require an additional do_free argument and need to be freed using free_feature_vector.

Logo JMLR RL Glue and Codecs -- Glue 3.x and Codecs

by btanner - October 12, 2009, 07:50:03 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 4923 views, 704 downloads, 1 subscription

About: RL-Glue allows agents, environments, and experiments written in Java, C/C++, Matlab, Python, and Lisp to inter operate, accelerating research by promoting software re-use in the community.

Changes:

RL-Glue paper has been published in JMLR.


Logo LibSGDQN 1.1

by antojne - July 2, 2009, 15:02:44 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 1228 views, 296 downloads, 1 subscription

About: LibSGDQN proposes an implementation of SGD-QN, a carefully designed quasi-Newton stochastic gradient descent solver for linear SVMs.

Changes:

small bug fix (thx nicolas ;)


Logo OLaRankGreedy 1.0

by antojne - June 24, 2009, 17:07:57 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 860 views, 187 downloads, 1 subscription

About: OLaRankGreedy is an online solver of the dual formulation of support vector machines for sequence labeling using greedy inference.

Changes:

Initial Announcement on mloss.org.


Logo OLaRankExact 1.0

by antojne - June 24, 2009, 17:03:48 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 835 views, 184 downloads, 1 subscription

About: OLaRank is an online solver of the dual formulation of support vector machines for sequence labeling using viterbi decoding.

Changes:

Initial Announcement on mloss.org.


Logo C MixSim 0.5

by volmeln - June 10, 2009, 19:37:42 CET [ Project Homepage BibTeX Download ] 1207 views, 293 downloads, 1 subscription

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About: C-MixSim is an open source package written in C for simulating finite mixture models with Gaussian components. With a vast number of clustering algorithms, evaluating performance is important. C-MixSim provides an easy and convenient way of generating datasets from Gaussian mixture models with different levels of clustering complexity. C-MixSim is released under the GNU GPL license.

Changes:

Initial Announcement on mloss.org.


Logo asp 0.2

by sonne - May 25, 2009, 10:06:19 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 1250 views, 307 downloads, 1 subscription

About: Accurate splice site predictor for a variety of genomes.

Changes:

Initial Announcement on mloss.org.


Logo arts 0.2

by sonne - May 25, 2009, 09:56:31 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 1139 views, 255 downloads, 1 subscription

About: ARTS is an accurate predictor for Transcription Start Sites (TSS).

Changes:

Initial Announcement on mloss.org.


Logo JMLR pebl Python Environment for Bayesian Learning 1.0.1

by abhik - March 5, 2009, 00:05:28 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 9134 views, 849 downloads, 1 subscription

About: Pebl is a python library and command line application for learning the structure of a Bayesian network given prior knowledge and observations.

Changes:

Updated version to 1.0.1


Logo SVQP 2

by leonbottou - January 31, 2009, 14:22:04 CET [ Project Homepage BibTeX Download ] 2004 views, 826 downloads, 0 subscriptions

About: SVQP1 and SVQP2 are QP solvers for training SVM.

Changes:

Initial Announcement on mloss.org.


Logo SGD 1.3

by leonbottou - January 31, 2009, 14:18:23 CET [ Project Homepage BibTeX Download ] 3255 views, 600 downloads, 2 subscriptions

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About: The SGD package contains a stochastic gradient implementation of linear SVMs and linear CRFs. It demonstrate that a simple stochastic gradient descent is very competitive algorithm for such tasks. [...]

Changes:

Initial Announcement on mloss.org.


Logo Alchemy 0.33

by marcs - December 16, 2008, 17:53:07 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 1714 views, 481 downloads, 1 subscription

About: Alchemy is a software package providing a series of algorithms for statistical relational learning and probabilistic logic inference, based on the Markov logic representation. Alchemy allows you to [...]

Changes:

Initial Announcement on mloss.org.


Logo Adaptive Resonance Theory for Unsupervised Learning 1.0

by ibaze - November 13, 2008, 16:40:28 CET [ Project Homepage BibTeX Download ] 2370 views, 612 downloads, 1 subscription

About: This software package includes the ART algorithms for unsupervised learning only. It is a family of four programs based on different ART algorithms (ART 1, ART 2A, ART 2A-C and ART Distance). All of [...]

Changes:

Initial Announcement on mloss.org.


Showing Items 1-20 of 28 on page 1 of 2: 1 2 Next