20 projects found that use python as the programming language.
Showing Items 61-80 of 95 on page 4 of 5: Previous 1 2 3 4 5 Next

Logo Epistatic MAP Imputation 1.1

by colm - November 25, 2010, 21:01:10 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 2803 views, 667 downloads, 1 subscription

About: Epistatic miniarray profiles (E-MAPs) are a high-throughput approach capable of quantifying aggravating or alleviating genetic interactions between gene pairs. The datasets resulting from E-MAP experiments typically take the form of a symmetric pairwise matrix of interaction scores. These datasets have a significant number of missing values - up to 35% - that can reduce the effectiveness of some data analysis techniques and prevent the use of others. This project contains nearest neighbor based tools for the imputation and prediction of these missing values. The code is implemented in Python and uses a nearest neighbor based approach. Two variants are used - a simple weighted nearest neighbors, and a local least squares based regression.

Changes:

Initial Announcement on mloss.org.


Logo Pyriel 1.5

by tfawcett - October 27, 2010, 09:12:53 CET [ BibTeX BibTeX for corresponding Paper Download ] 11204 views, 2424 downloads, 1 subscription

About: Pyriel is a Python system for learning classification rules from data. Unlike other rule learning systems, it is designed to learn rule lists that maximize the area under the ROC curve (AUC) instead of accuracy. Pyriel is mostly an experimental research tool, but it's robust and fast enough to be used for lightweight industrial data mining.

Changes:

1.5 Changed CF (confidence factor) to do LaPlace smoothing of estimates. New flag "--score-for-class C" causes scores to be computed relative to a given (positive) class. For two-class problems. Fixed bug in example sampling code (--sample n) Fixed bug keeping old-style example formats (terminated by dot) from working. More code restructuring.


Logo BCPy2000 17374

by jez - July 8, 2010, 22:11:24 CET [ Project Homepage BibTeX Download ] 14136 views, 2590 downloads, 1 subscription

About: BCPy2000 provides a platform for rapid, flexible development of experimental Brain-Computer Interface systems based on the BCI2000.org project. From the developer's point of view, the implementation [...]

Changes:

Bugfixes and tuneups, and an expanded set of (some more-, some less-documented, optional tools)


Logo asp 0.3

by sonne - May 7, 2010, 10:25:39 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 7659 views, 1517 downloads, 1 subscription

About: Accurate splice site predictor for a variety of genomes.

Changes:

Asp now supports three formats:

-g fname for gff format

-s fname for spf format

-b dir for a binary format compatible with mGene.

And a new switch

-t which switches on a sigmoid-based transformation of the svm scores to get scores between 0 and 1.


Logo yaplf 0.7

by malchiod - April 22, 2010, 11:34:07 CET [ Project Homepage BibTeX Download ] 3396 views, 831 downloads, 1 subscription

About: yaplf (Yet Another Python Learning Framework) is an extensible machine learning framework written in python

Changes:

Initial Announcement on mloss.org.


Logo JMLR PyBrain 0.3

by bayerj - March 3, 2010, 15:00:08 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 15558 views, 1776 downloads, 2 subscriptions

About: PyBrain is a versatile machine learning library for Python. Its goal is to provide flexible, easy-to-use yet still powerful algorithms for machine learning tasks, including a variety of predefined [...]

Changes:
  • more documentation, including new tutorials
  • new and updated example scripts
  • major restructuring of the reinforcement learning part
  • homogeneous interface for optimization algorithms
  • fast networks (arac) are now in an independent package
  • new algorithms, network structures, tools...

Logo LIBSVM 2.9

by cjlin - February 27, 2010, 01:09:23 CET [ Project Homepage BibTeX Download ] 10697 views, 2185 downloads, 1 subscription

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About: LIBSVM is an integrated software for support vector classification, (C-SVC, nu-SVC ), regression (epsilon-SVR, nu-SVR) and distribution estimation (one-class SVM). It supports multi-class [...]

Changes:

Initial Announcement on mloss.org.


Logo Elefant 0.4

by kishorg - October 17, 2009, 08:48:19 CET [ Project Homepage BibTeX Download ] 17232 views, 7431 downloads, 2 subscriptions

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About: Elefant is an open source software platform for the Machine Learning community licensed under the Mozilla Public License (MPL) and developed using Python, C, and C++. We aim to make it the platform [...]

Changes:

This release contains the Stream module as a first step in the direction of providing C++ library support. Stream aims to be a software framework for the implementation of large scale online learning algorithms. Large scale, in this context, should be understood as something that does not fit in the memory of a standard desktop computer.

Added Bundle Methods for Regularized Risk Minimization (BMRM) allowing to choose from a list of loss functions and solvers (linear and quadratic).

Added the following loss classes: BinaryClassificationLoss, HingeLoss, SquaredHingeLoss, ExponentialLoss, LogisticLoss, NoveltyLoss, LeastMeanSquareLoss, LeastAbsoluteDeviationLoss, QuantileRegressionLoss, EpsilonInsensitiveLoss, HuberRobustLoss, PoissonRegressionLoss, MultiClassLoss, WinnerTakesAllMultiClassLoss, ScaledSoftMarginMultiClassLoss, SoftmaxMultiClassLoss, MultivariateRegressionLoss

Graphical User Interface provides now extensive documentation for each component explaining state variables and port descriptions.

Changed saving and loading of experiments to XML (thereby avoiding storage of large input data structures).

Unified automatic input checking via new static typing extending Python properties.

Full support for recursive composition of larger components containing arbitrary statically typed state variables.


Logo JMLR RL Glue and Codecs -- Glue 3.x and Codecs

by btanner - October 12, 2009, 07:50:03 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 16282 views, 1832 downloads, 1 subscription

About: RL-Glue allows agents, environments, and experiments written in Java, C/C++, Matlab, Python, and Lisp to inter operate, accelerating research by promoting software re-use in the community.

Changes:

RL-Glue paper has been published in JMLR.


Logo Dirichlet Forest LDA 0.1.1

by davidandrzej - July 16, 2009, 21:59:53 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 4651 views, 905 downloads, 1 subscription

About: This software implements the Dirichlet Forest (DF) Prior within the Latent Dirichlet Allocation (LDA) model. When combined with LDA, the Dirichlet Forest Prior allows the user to encode domain knowledge (must-links and cannot-links between words) into the prior on topic-word multinomials.

Changes:

Initial Announcement on mloss.org.


Logo DeltaLDA 0.1.1

by davidandrzej - July 16, 2009, 21:52:18 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 7176 views, 1244 downloads, 1 subscription

About: This software implements the DeltaLDA model, which is a modification of the Latent Dirichlet Allocation (LDA) model. DeltaLDA can use multiple topic mixing weight priors to jointly model multiple [...]

Changes:

-fixed some npy_intp[] memory leaks -fixed phi normalization bug


Logo Easysvm 0.3

by gxr - June 25, 2009, 18:33:04 CET [ Project Homepage BibTeX Download ] 8190 views, 1563 downloads, 1 subscription

About: The Easysvm package provides a set of tools based on the Shogun toolbox allowing to train and test SVMs in a simple way.

Changes:

Fixes for shogun 0.7.3.


Logo arts 0.2

by sonne - May 25, 2009, 09:56:31 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 4504 views, 944 downloads, 1 subscription

About: ARTS is an accurate predictor for Transcription Start Sites (TSS).

Changes:

Initial Announcement on mloss.org.


Logo JMLR Nieme 1.0

by francis - April 2, 2009, 10:57:38 CET [ Project Homepage BibTeX Download ] 17812 views, 2334 downloads, 1 subscription

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About: Nieme is a C++ machine learning library for large-scale classification, regression and ranking. It provides a simple interface available in C++, Python and Java and a user interface for visualization.

Changes:

Released Nieme 1.0


Logo stroll 0.1

by ppletscher - April 1, 2009, 14:32:31 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 4109 views, 910 downloads, 1 subscription

About: stroll (STRuctured Output Learning Library) is a library for Structured Output Learning.

Changes:

Initial Announcement on mloss.org.


Logo dataformat 0.1.1

by mikio - March 12, 2009, 16:07:55 CET [ Project Homepage BibTeX Download ] 7089 views, 1319 downloads, 2 subscriptions

About: The goal of this project is to provide code for reading and writing machine learning data sets for as many programming languages as possible.

Changes:

Forgot to include the Java sources.


Logo JMLR pebl Python Environment for Bayesian Learning 1.0.1

by abhik - March 5, 2009, 00:05:28 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 22569 views, 2193 downloads, 1 subscription

About: Pebl is a python library and command line application for learning the structure of a Bayesian network given prior knowledge and observations.

Changes:

Updated version to 1.0.1


Logo chi2 kernel 1.5

by gruel - February 15, 2009, 22:32:21 CET [ BibTeX Download ] 8959 views, 1996 downloads, 1 subscription

About: Very fast implementation of the chi-squared distance between histograms (or vectors with non-negative entries).

Changes:

Removed bug in symmetric chi-square distance and updated python wrapper to python 2.5 compatiblity.


Logo Pynopticon 0.1

by Wiecki - February 1, 2009, 18:55:10 CET [ Project Homepage BibTeX Download ] 3496 views, 985 downloads, 1 subscription

About: Pynopticon is a toolbox that allows you to create and train your own object recognition classifiers. It makes rapid prototyping of object recognition work flows a snap. Simply create a dataset of [...]

Changes:

Initial Announcement on mloss.org.


Logo MPIKmeans 1.5

by pgehler - January 16, 2009, 15:48:47 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 33069 views, 5149 downloads, 1 subscription

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About: A K-means clustering implementation for command-line, Python, Matlab and C. This algorithm yields the very same solution as standard Kmeans, even after each iteration. However it uses some triangle [...]

Changes:

Initial Announcement on mloss.org.


Showing Items 61-80 of 95 on page 4 of 5: Previous 1 2 3 4 5 Next