Projects supporting the matlab data format.
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About: This toolbox implements a novel visualization technique called Sectors on Sectors (SonS), and a extended version called Multidimensional Sectors on Sectors (MDSonS), for improving the interpretation of several data mining algorithms. The MDSonS method makes use of Multidimensional Scaling (MDS) to solve the main drawback of the previous method, namely, the lack of representing distances between pairs of clusters. These methods have been applied for visualizing the results of hierarchical clustering, Growing Hierarchical Self-Organizing Maps (GHSOM), classification trees and several manifolds. These methods make possible to extract all the existing relationships among centroids’ attributes at any hierarchy level.

Changes:

Initial Announcement on mloss.org.


Logo JMLR GPstuff 4.2

by avehtari - June 17, 2013, 13:22:52 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 2476 views, 408 downloads, 1 subscription

About: The GPstuff toolbox is a versatile collection of Gaussian process models and computational tools required for inference. The tools include, among others, various inference methods, sparse approximations and model assessment methods.

Changes:

2013-06-14 Version 4.2

Improvements

  • Cross-validation much faster if no bias-corrections are needed (computes only the necessary predictions)
  • Marginal posterior corrections with loopred (Laplace) and cross-validation
  • More robust computation of marginal posterior corrections
  • More robust density estimation in lgpdens (default parameters changed)

Bug fixes

  • Mex files now in correct folders if compiled with SuiteSparse (covariance matrix computation now much faster)
  • Fixed bug with default marginal posterior correction when using gp_predcm
  • Fixed conditions in likelihood functions for grid approximation of predictions with marginal posterior corrections
  • Fixed outputs of gpmc_preds with multilatent models (thanks to Mahdi Biparva for pointing this out)
  • and some minor bug fixes

Logo Information Theoretical Estimators 0.39

by szzoli - June 12, 2013, 13:12:52 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 11795 views, 2521 downloads, 1 subscription

About: ITE (Information Theoretical Estimators) is capable of estimating many different variants of entropy, mutual information, divergence, association measures and cross quantities. Thanks to its highly modular design, ITE supports additionally (i) the combinations of the estimation techniques, (ii) the easy construction and embedding of novel information theoretical estimators, and (iii) their immediate application in information theoretical optimization problems.

Changes:
  • Symmetric Bregman distance estimation based on nonsymmetric Bregman distance: added,

  • Symmetric Bregman distance estimation using the k-nearest neighbor method: added.


Logo Cognitive Foundry 3.3.3

by Baz - May 21, 2013, 05:59:37 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 9013 views, 1796 downloads, 2 subscriptions

About: The Cognitive Foundry is a modular Java software library of machine learning components and algorithms designed for research and applications.

Changes:
  • General:
    • Made code able to compile under both Java 1.6 and 1.7. This required removing some potentially unsafe methods that used varargs with generics.
    • Upgraded XStream dependency to 1.4.4.
    • Improved support for regression algorithms in learning.
    • Added general-purpose adapters to make it easier to compose learning algorithms and adapt their input or output.
  • Common Core:
    • Added isSparse, toArray, dotDivide, and dotDivideEquals methods for Vector and Matrix.
    • Added scaledPlus, scaledPlusEquals, scaledMinus, and scaledMinusEquals to Ring (and thus Vector and Matrix) for potentially faster such operations.
    • Fixed issue where matrix and dense vector equals was not checking for equal dimensionality.
    • Added transform, transformEquals, tranformNonZeros, and transformNonZerosEquals to Vector.
    • Made LogNumber into a signed version of a log number and moved the prior unsigned implementation into UnsignedLogNumber.
    • Added EuclideanRing interface that provides methods for times, timesEquals, divide, and divideEquals. Also added Field interface that provides methods for inverse and inverseEquals. These interfaces are now implemented by the appropriate number classes such as ComplexNumber, MutableInteger, MutableLong, MutableDouble, LogNumber, and UnsignedLogNumber.
    • Added interface for Indexer and DefaultIndexer implementation for creating a zero-based indexing of values.
    • Added interfaces for MatrixFactoryContainer and DivergenceFunctionContainer.
    • Added ReversibleEvaluator, which various identity functions implement as well as a new utility class ForwardReverseEvaluatorPair to create a reversible evaluator from a pair of other evaluators.
    • Added method to create an ArrayList from a pair of values in CollectionUtil.
    • ArgumentChecker now properly throws assertion errors for NaN values. Also added checks for long types.
    • Fixed handling of Infinity in subtraction for LogMath.
    • Fixed issue with angle method that would cause a NaN if cosine had a rounding error.
    • Added new createMatrix methods to MatrixFactory that initializes the Matrix with the given value.
    • Added copy, reverse, and isEmpty methods for several array types to ArrayUtil.
    • Added utility methods for creating a HashMap, LinkedHashMap, HashSet, or LinkedHashSet with an expected size to CollectionUtil.
    • Added getFirst and getLast methods for List types to CollectionUtil.
    • Removed some calls to System.out and Exception.printStackTrace.
  • Common Data:
    • Added create method for IdentityDataConverter.
    • ReversibleDataConverter now is an extension of ReversibleEvaluator.
  • Learning Core:
    • Added general learner transformation capability to make it easier to adapt and compose algorithms. InputOutputTransformedBatchLearner provides this capability for supervised learning algorithms by composing together a triplet. CompositeBatchLearnerPair does it for a pair of algorithms.
    • Added a constant and identity learners.
    • Added Chebyshev, Identity, and Minkowski distance metrics.
    • Added methods to DatasetUtil to get the output values for a dataset and to compute the sum of weights.
    • Made generics more permissive for supervised cost functions.
    • Added ClusterDistanceEvaluator for taking a clustering that encodes the distance from an input value to all clusters and returns the result as a vector.
    • Fixed potential round-off issue in decision tree splitter.
    • Added random subspace technique, implemented in RandomSubspace.
    • Separated functionality from LinearFunction into IdentityScalarFunction. LinearFunction by default is the same, but has parameters that can change the slope and offset of the function.
    • Default squashing function for GeneralizedLinearModel and DifferentiableGeneralizedLinearModel is now a linear function instead of an atan function.
    • Added a weighted estimator for the Poisson distribution.
    • Added Regressor interface for evaluators that are the output of (single-output) regression learning algorithms. Existing such evaluators have been updated to implement this interface.
    • Added support for regression ensembles including additive and averaging ensembles with and without weights. Added a learner for regression bagging in BaggingRegressionLearner.
    • Added a simple univariate regression class in UnivariateLinearRegression.
    • MultivariateDecorrelator now is a VectorInputEvaluator and VectorOutputEvaluator.
    • Added bias term to PrimalEstimatedSubGradient.
  • Text Core:
    • Fixed issue with the start position for tokens from LetterNumberTokenizer being off by one except for the first one.

Logo Social Impact theory based Optimizer library 1.0.1

by rishem - May 7, 2013, 08:03:06 CET [ Project Homepage BibTeX Download ] 753 views, 152 downloads, 1 subscription

About: This is an optimization library based on Social Impact Theory(SITO). The optimizer works in the same way as PSO and GA.

Changes:

minor changes


Logo OptWok 0.3.1

by ong - May 2, 2013, 10:46:11 CET [ Project Homepage BibTeX Download ] 4582 views, 757 downloads, 1 subscription

About: A collection of python code to perform research in optimization. The aim is to provide reusable components that can be quickly applied to machine learning problems. Used in: - Ellipsoidal multiple instance learning - difference of convex functions algorithms for sparse classfication - Contextual bandits upper confidence bound algorithm (using GP) - learning output kernels, that is kernels between the labels of a classifier.

Changes:
  • minor bugfix

Logo JMLR MSVMpack 1.3

by lauerfab - April 23, 2013, 10:44:37 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 5815 views, 2205 downloads, 1 subscription

About: MSVMpack is a Multi-class Support Vector Machine (M-SVM) package. It is dedicated to SVMs which can handle more than two classes without relying on decomposition methods and implements the four M-SVM models from the literature: Weston and Watkins M-SVM, Crammer and Singer M-SVM, Lee, Lin and Wahba M-SVM, and the M-SVM2 of Guermeur and Monfrini.

Changes:
  • Added Matlab interface.

Logo ChaLearn Gesture Challenge Turtle Tamers 1.0

by konkey - March 17, 2013, 18:39:22 CET [ BibTeX Download ] 324 views, 113 downloads, 1 subscription

About: Soltion developed by team Turtle Tamers in the ChaLearn Gesture Challenge (http://www.kaggle.com/c/GestureChallenge2)

Changes:

Initial Announcement on mloss.org.


Logo cbMDS Correlation Based Multi Dimensional Scaling 1.1

by emstrick - March 11, 2013, 11:47:39 CET [ BibTeX BibTeX for corresponding Paper Download ] 994 views, 269 downloads, 1 subscription

About: The aim is to embed a given data relationship matrix into a low-dimensional Euclidean space such that the point distances / distance ranks correlate best with the original input relationships. Input relationships may be given as (asymmetric) distances, dissimilarities, or (negative) scores. Input-output relations are modelled as row-conditioned. (Weighted) Pearson and soft Spearman rank correlation, and unweighted soft Kendall correlation are supported correlation measures for input/output object neighborhood relationships.

Changes:
  • Initial release (Ver 1.0): Weighted Pearson and correlation and soft Spearman rank correlation, Tue Dec 4 16:14:51 CET 2012

  • Ver 1.1 Added soft Kendall correlation, Fri Mar 8 08:41:09 CET 2013


Logo JMLR GPML Gaussian Processes for Machine Learning Toolbox 3.2

by hn - January 21, 2013, 15:34:50 CET [ Project Homepage BibTeX Download ] 10017 views, 2773 downloads, 3 subscriptions

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About: The GPML toolbox is a flexible and generic Octave 3.2.x and Matlab 7.x implementation of inference and prediction in Gaussian Process (GP) models.

Changes:

We now support inference on large datasets using the FITC approximation for non-Gaussian likelihoods for EP and Laplace's approximation. New likelihood functions: mixture likelihood, Poisson likelihood, label noise. We added two MCMC samplers.


Logo JMLR Sally 0.8.1

by konrad - December 27, 2012, 14:34:31 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 12235 views, 2319 downloads, 2 subscriptions

About: A Tool for Embedding Strings in Vector Spaces

Changes:

Support for positional n-grams with shift (similar to weighted-degree kernel with shift) has been added. Several minor bugs have been fixed.


About: Stochastic neighbor embedding aims at the reconstruction of given distance, dissimilarity, or score neighborhood relations in a low-dimensional Euclidean space. This can be regarded as general approach to multi-dimensional scaling, but the reconstruction is based on the definition of input (and output) neighborhood probability alone. Probability of score exceedance is used for neighborhood probability estimation, which is connected to soft-rank optimization. The present implementation makes use of quasi 2nd order gradient-based (l-)BFGS optimization.

Changes:
  • scoretoprob.m replaced by d2p.m

  • protein score data set added

  • trank.m computes (mid/max -tied) ranks along columns of matrix

  • local P- neighborhood probability estimation added

  • experimental soft_rank_SNE added for minimizing KL between probabilities of exceedance in source and embedding space

  • symmetry option removed, because this was strange in previous version


Logo GradMC 1.00

by tur - October 18, 2012, 17:42:02 CET [ BibTeX Download ] 481 views, 175 downloads, 1 subscription

About: GradMC is an algorithm for MR motion artifact removal implemented in Matlab

Changes:

Initial Announcement on mloss.org.


Logo VLFeat 0.9.16

by andreavedaldi - October 5, 2012, 18:44:17 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 3993 views, 694 downloads, 1 subscription

About: The VLFeat open source library implements popular computer vision algorithms including affine covariant feature detectors, HOG, SIFT, MSER, k-means, hierarchical k-means, agglomerative information bottleneck, SLIC superpixels, and quick shift. It is written in C for efficiency and compatibility, with interfaces in MATLAB for ease of use, and detailed documentation throughout. It supports Windows, Mac OS X, and Linux. The latest version of VLFeat is 0.9.16.

Changes:

VLFeat 0.9.16: Added VL_COVDET() (covariant feature detectors). This function implements the following detectors: DoG, Hessian, Harris Laplace, Hessian Laplace, Multiscale Hessian, Multiscale Harris. It also implements affine adaptation, estiamtion of feature orientation, computation of descriptors on the affine patches (including raw patches), and sourcing of custom feature frame. Addet the auxiliary function VL_PLOTSS(). This is the second point update supported by the PASCAL Harvest programme.

VLFeat 0.9.15: Added VL_HOG() (HOG features). Added VL_SVMPEGASOS() and a vastly improved SVM implementation. Added IHASHSUM (hashed counting). Improved INTHIST (integral histogram). Added VL_CUMMAX(). Improved the implementation of VL_ROC() and VL_PR(). Added VL_DET() (Detection Error Trade-off (DET) curves). Improved the verbosity control to AIB. Added support for Xcode 4.3, improved support for past and future Xcode versions. Completed the migration of the old test code in toolbox/test, moving the functionality to the new unit tests toolbox/xtest. Improved credits. This is the first point update supported by the PASCAL Harvest (several more to come shortly).


Logo SVMStructMATLAB 1.2

by andreavedaldi - September 12, 2012, 00:25:57 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 5984 views, 1127 downloads, 1 subscription

About: svm-struct-matlab is a MATLAB wrapper of T. Joachims' SVM^struct solver for structured output support vector machines.

Changes:

Adds support for Xcode 4.0 and Mac OS X 10.7 and greater.


Logo SVM with uncertain labels 0.2

by rflamary - July 17, 2012, 11:06:23 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 3049 views, 596 downloads, 2 subscriptions

About: Matlab code for learning probabilistic SVM in the presence of uncertain labels.

Changes:

Added missing dataset function (thanks to Hao Wu)


Logo Uncorrelated Multilinear Discriminant Analysis 1.0

by hplu - July 7, 2012, 06:27:56 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 1406 views, 245 downloads, 1 subscription

About: A Matlab implementation of Uncorrelated Multilinear Discriminant Analysis (UMLDA) for dimensionality reduction of tensor data via tensor-to-vector projection

Changes:

Initial Announcement on mloss.org.


Logo Uncorrelated Multilinear Principal Component Analysis 1.0

by hplu - June 18, 2012, 17:23:52 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 1307 views, 225 downloads, 1 subscription

About: A Matlab implementation of Uncorrelated Multilinear PCA (UMPCA) for dimensionality reduction of tensor data via tensor-to-vector projection

Changes:

Initial Announcement on mloss.org.


About: The package provides a Lagrangian approach to the posterior regularization of given linear mappings. This is important in two cases, (a) when systems are under-determined and (b) when the external model for calculating the mapping is invariant to properties such as scaling. The software may be applied in cases when the external model does not provide its own regularization strategy. In addition, the package allows to rank attributes according to their distortion potential to a given linear mapping.

Changes:

Version 1.1 (May 23, 2012) memory and time optimizations distderivrel.m now supports assessing the relevance of attribute pairs

Version 1.0 (Nov 9, 2011) * Initial Announcement on mloss.org.


Logo Multilinear Principal Component Analysis 1.2

by hplu - April 8, 2012, 09:54:39 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 1446 views, 261 downloads, 1 subscription

About: A Matlab implementation of Multilinear PCA (MPCA) and MPCA+LDA for dimensionality reduction of tensor data

Changes:

Initial Announcement on mloss.org.


Showing Items 1-20 of 56 on page 1 of 3: 1 2 3 Next